2017-8-11 16:0:32025-04-10 19:24:20
locus
BSU18000
BSU_18000
geneLength
2727
2730
outlinks
bsu
BSU18000
BSU_18000
The protein
Catalyzed reaction/ biological activity
Citrate <=> isocitrate
Binding to iron responsive elements (IRE RNA) in the absence of the FeS cluster [Pubmed|23354745,10468622]
Citrate --> isocitrate (according to UniProt)
3-hydroxybutane-1,2,3-tricarboxylate --> 2-methyl-cis-aconitate + H2O (according to UniProt)
Binding to iron responsive elements (IRE RNA) in the absence of the FeS cluster [Pubmed|23354745,10468622]
2-methylaconitate --> 2-methyl-isocitrate in the methylcitric acid cycle [pubmed|28956599]
The protein
[SW|Cofactors]
FeS cluster
FeS cluster [pubmed|29292548]
The protein
Structure
[PDB|1L5J] (''E. coli'') [pubmed|11992126]
[PDB|2B3X] (the human enzyme, 53% identity) [pubmed|16407072]
Biological materials
Mutant
GP1275 (Δ''citB''::''erm''), available in [SW|Jörg Stülke]'s lab
GP1441 (ΔcitB::spc), available in [SW|Jörg Stülke]'s lab
1A999 (''citB''::''spec''), [Pubmed| ], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A999&Search=1A999 BGSC]
GP2338 (Δ''[[gene|citB]]''::''kan''), Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab
GP2339 (Δ''[[gene|citB]]''::''lox72''), Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab
GP1275 Δ''citB''::''erm'', available in [SW|Jörg Stülke]'s lab
GP1441 ΔcitB::spc, available in [SW|Jörg Stülke]'s lab
1A999 (''citB'')::''spec'', [Pubmed| ], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A999&Search=1A999 BGSC]
GP2338 Δ''[[gene|citB]]''::''kan'', Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab
GP2339 Δ''[[gene|citB]]''::''lox72'', Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab
BKE18000 (Δ[[gene|citB]]::erm trpC2)available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18000 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTCCAAAATCCCCCTT, downstream forward: _UP4_TGATGAATCAATAGGAAGAG
BKK18000 (Δ[[gene|citB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18000 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTCCAAAATCCCCCTT, downstream forward: _UP4_TGATGAATCAATAGGAAGAG
Biological materials
lacZ fusion
pGP700 (in [[protein|pAC5]]), available in [SW|Jörg Stülke]'s lab
pGP700 (in [SW|pAC5]), available in [SW|Jörg Stülke]'s lab
Labs working on this gene/protein
[SW|Linc Sonenshein], Tufts University, Boston, MA, USA [http://www.tufts.edu/sackler/microbiology/faculty/sonenshein/index.html Homepage]
[SW|Jörg Stülke], University of Göttingen, Germany [http://wwwuser.gwdg.de/~genmibio/stuelke.html Homepage]
References
Reviews
References
Original publications
The protein
Protein family
aconitase/IPM isomerase family (with [[protein|LeuC]], according to UniProt)
The protein
Paralogous protein(s)
[[this]]
Biological materials
Expression vector
pGP1810 (N-terminal Strep-tag, purification from ''E. coli'', in [SW|pGP172]), available in [SW|Jörg Stülke]'s lab
labs
[SW|Linc Sonenshein], Tufts University, Boston, MA, USA [http://www.tufts.edu/sackler/microbiology/faculty/sonenshein/index.html Homepage]
[SW|Jörg Stülke], University of Göttingen, Germany [http://genmibio.uni-goettingen.de Homepage]